miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|45242736|gb|CK854136.1|CK854136 AAAGCATCAACGAACAACTTAGAGAAGTTTGATCAAGTTTAGAATTGTTTACACAATGTAAAAGCAGAAATATACAGGTA
CAATTGAATTTTCCACCAAATTGTTGCAGCTTGGAATTTTCAATTGAATAGTACAACCGCAAAATATAGCATCATCATCC
GAGTTAACTCTCATTAGTGTCTCCATCAATGTTATTACCAAGTTCACCCAGATTTGAACAGAAGTACAGCTTTTGAATCC
AAATAGAAGTAGACAAAGTGGTTCGTTTCATGAGTCACATAAGAGCCGAAGTTTTTTCCGACGATGCAATGCCAAGTAGG
ACCGTACTTCTTATCAAACTCCTTCTTAATCAGTTCAGCTACATCCTTCTCTACATTATGCTTCTCAAATGCAGCAATAG
CAATGTCGACGGCCTCCTTTTGTACATCAGGTTTCATATCGGCACTCTTTATGGTAACTTTTGTACCGGTAGGTGAAGGA
ACGGAACCTGATG




Most similar to sp|Q78P75|DYL2_RAT

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|Q78P75|DYL2_RAT Dynein light chain 2, cytoplasmic OS=Rattus
          Length = 89

 Score =  135 bits (339), Expect = 2e-31
 Identities = 60/85 (70%), Positives = 70/85 (82%)
 Frame = -3

Query: 461 KVTIKSADMKPDVQKEAVDIAIAAFEKHNVEKDVAELIKKEFDKKYGPTWHCIVGKNFGS 282
           K  IK+ADM  D+Q++AVD A  A EK+N+EKD+A  IKKEFDKKY PTWHCIVG+NFGS
Sbjct: 5   KAVIKNADMSEDMQQDAVDCATQAMEKYNIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGS 64

Query: 281 YVTHETNHFVYFYLDSKAVLLFKSG 207
           YVTHET HF+YFYL   A+LLFKSG
Sbjct: 65  YVTHETKHFIYFYLGQVAILLFKSG 89